miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|209449626|gb|BY813804.1|BY813804 TTTTAACATAAAGTCCACTGAATCAGAACAGTTTTATCAAGGGGGAAGACAAAAAAAGAAAAGAGGCAAGCAAGATCAGA
TTGTTGAAATGAGTCTACTTGATCTTCTTCTTAGGCCTCAACTGGTTGCTATGGCCACATTTCTTCTTCCTGCAGTTCAC
GGCCCTTGGGTGAAGACGAGCGTAACACTTGCGGCAAATCATCTTGTCTTGGTTGTACTTACGAGCCAACGCCATCAAAG
AAGGCTCAATGATACCTCCTCTGAGCCTCAACACAAGATGAAGCGTGGATTCTTTCTGGATGTTGTAGTCAGCCAAAGTA
CGGCCATCTTCGAGCTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCTTGGATCTTGGC
CTTGACATTGTCGATGGTATCTGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCA
TCTTTTTTAGTTCGTCTTCTATCCCGCC




Most similar to sp|P49636|RL40_NICSY

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P49636|RL40_NICSY Ubiquitin-60S ribosomal protein L40
           OS=Nicotiana sylvestris GN=UBICEP52-7 PE=2 SV=2
          Length = 128

 Score =  258 bits (658), Expect = 2e-68
 Identities = 127/128 (99%), Positives = 128/128 (100%)
 Frame = -1

Query: 481 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 302
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 301 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 122
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCR+KKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRRKKCGHSNQ 120

Query: 121 LRPKKKIK 98
           LRPKKKIK
Sbjct: 121 LRPKKKIK 128